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AT1G10850 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10850" - Leucine-rich repeat protein kinase-like protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10850Leucine-rich repeat protein kinase-like protein (663 aa)    
Predicted Functional Partners:
AT1G59660
Nucleoporin autopeptidase (997 aa)
           
  0.801
AT1G10390
Nucleoporin autopeptidase (1041 aa)
           
  0.778
AT3G01340
transducin/WD-40 repeat-containing protein; Required for protein transport from the endoplasmic reticulum to the Golgi apparatus (302 aa)
           
  0.738
AT4G30840
transducin/WD40 domain-containing protein (361 aa)
     
   
  0.715
AT3G14120
Uncharacterized protein (1101 aa)
     
   
  0.622
AT2G05120
Nucleoporin, Nup133/Nup155-like (1285 aa)
     
   
  0.587
AT3G56370
Leucine-rich repeat protein kinase-like protein (964 aa)
     
     
0.555
AT4G32910
Uncharacterized protein; Functions as component of the nuclear pore complex (NPC) (716 aa)
           
  0.553
AT2G30050
Protein transport protein SEC13; Required for protein transport from the endoplasmic reticulum to the Golgi apparatus (302 aa)
           
  0.550
NUP160
SUPPRESSOR OF AUXIN RESISTANCE1; Contributes to the transfer of mature mRNA from the nucleus to the cytosol. Required for both R gene-mediated and basal disease resistance. RNA export seems to play a critical role in stress responses and regulation of plant growth and development. Required for proper expression of factors associated with auxin signaling (1504 aa)
     
   
  0.535
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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