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AT1G11120 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11120" - CTTNBP 2 amino-terminal-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G11120CTTNBP 2 amino-terminal-like protein; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species- Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source- NCBI BLink) (187 aa)    
Predicted Functional Partners:
AT1G61170
Uncharacterized protein At1g61170; Unknown protein; Its function is described as molecular_function unknown; Involved in N-terminal protein myristoylation; Located in cellular_component unknown; Expressed in 19 plant structures; Expressed during 12 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species- Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source- NCBI BLink) (251 aa)
 
 
   
  0.691
MYB5
Transcription repressor MYB5; Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches) (249 aa)
           
  0.586
AT3G60110
DNA-binding bromodomain-containing protein; Its function is described as DNA binding; Expressed in 15 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- SANT, DNA-binding (InterPro-IPR001005), Homeodomain-like (InterPro-IPR009057), Myb, DNA-binding (InterPro-IPR014778), Bromodomain (InterPro-IPR001487); BEST Arabidopsis thaliana protein match is- DNA-binding bromodomain-containing protein (TAIR-AT2G44430.1); Has 40209 Blast hits to 25016 proteins in 1620 species- Archae - 68; Bacteria - 5263; Metazoa - 15621; Fungi - 3406; Plants - 1675; Viruse [...] (641 aa)
           
  0.563
AT3G57980
DNA-binding bromodomain-containing protein; Its function is described as DNA binding; Expressed in 13 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- SANT, DNA-binding (InterPro-IPR001005), Myb, DNA-binding (InterPro-IPR014778), Bromodomain (InterPro-IPR001487), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro-IPR017930); BEST Arabidopsis thaliana protein match is- DNA-binding bromodomain-containing protein (TAIR-AT2G42150.1); Has 5050 Blast hits to 3932 proteins in 403 species- Archae - 12; Bacteria - 304; Metazoa - 2409; Fung [...] (632 aa)
           
  0.563
AT2G44430
DNA-binding bromodomain-containing protein; Its function is described as DNA binding; Expressed in stem, male gametophyte, flower, carpel; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- SANT, DNA-binding (InterPro-IPR001005), Homeodomain-like (InterPro-IPR009057), Myb, DNA-binding (InterPro-IPR014778), Bromodomain (InterPro-IPR001487), MYB-like (InterPro-IPR017877); BEST Arabidopsis thaliana protein match is- DNA-binding bromodomain-containing protein (TAIR-AT3G60110.1); Has 27183 Blast hits to 17808 proteins in 1233 spe [...] (646 aa)
           
  0.563
AT2G42150
DNA-binding bromodomain-containing protein; Its function is described as DNA binding; Located in nucleus; Expressed in 12 plant structures; Expressed during LP.04 four leaves visible, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Contains the following InterPro domains- SANT, DNA-binding (InterPro-IPR001005), Myb, DNA-binding (InterPro-IPR014778), Bromodomain (InterPro-IPR001487); BEST Arabidopsis thaliana protein match is- DNA-binding bromodomain-containing protein (TAIR-AT3G57980.1); Has 2988 Blast hits to 2572 protei [...] (631 aa)
           
  0.563
DWA3
Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (1181 aa)
           
  0.475
AT1G11160
Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays (1021 aa)
           
  0.475
MRLK
Protein kinase expressed in meristematic cells. Phosphorylates AGL24 (719 aa)
     
   
  0.416
IMK2
Probably inactive leucine-rich repeat receptor-like protein kinase IMK2; Encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors (836 aa)
     
   
  0.410
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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