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AT1G11240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11240" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11240Uncharacterized protein (200 aa)    
Predicted Functional Partners:
AT5G11750
Ribosomal protein L19 family protein (229 aa)
           
  0.739
AT4G34800
SAUR-like auxin-responsive protein (94 aa)
           
  0.739
AT4G32020
Uncharacterized protein (181 aa)
           
  0.739
AT3G16800
Putative protein phosphatase 2C 41 (351 aa)
           
  0.739
LSM1A
SM-like 1A; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5’-3’ mRNA decay. LSM1A and LSM1B are essential for the formation of the cytoplasmic LSM1-LSM7 complex which regulates developmental gene expression by the decapping of specific development-related transcripts (PubMed-23221597, PubMed-23620288). Required for P-body formation during heat stress (PubMed-23221597) (128 aa)
           
  0.678
LSM1B
SM-like 1B; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation by promoting decapping and leading to accurate 5’-3’ mRNA decay. LSM1A and LSM1B are essential for the formation of the cytoplasmic LSM1-LSM7 complex which regulates developmental gene expression by the decapping of specific development-related transcripts (PubMed-23221597, PubMed-23620288). Required for P-body formation during heat stress (PubMed-23221597) (128 aa)
           
  0.670
AT1G73120
Uncharacterized protein (109 aa)
           
  0.649
AT5G55450
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (104 aa)
           
  0.637
AT3G17250
Putative protein phosphatase 2C 43 (422 aa)
           
  0.637
WNK2
With no lysine (K) kinase 2 (627 aa)
           
  0.634
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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