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SD1-13 protein (Arabidopsis thaliana) - STRING interaction network
"SD1-13" - G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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SD1-13G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13; Receptor-like serine/threonine-protein kinase that represses the disease resistance signaling pathway triggered in response to bacterial pathogen such as Pseudomonas syringae pv. tomato (830 aa)    
Predicted Functional Partners:
CAM3
Calmodulin 3; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases (149 aa)
       
      0.671
CAM2
Calmodulin 2; Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6 (161 aa)
       
      0.671
PID2
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons (525 aa)
           
  0.633
AT3G12977
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein; Its function is described as DNA binding; Involved in regulation of transcription; Located in cellular_component unknown; Contains the following InterPro domains- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- NAC domain containing protein 1 (TAIR-AT1G56010.2); Has 2993 Blast hits to 2988 proteins in 77 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2989; Viruses - 0; Other Eukaryotes - 4 (source- NCBI BLink) (279 aa)
           
  0.553
RRP41L
3’-5’-exoribonuclease family protein; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity (By similarity). Plays an important role in seed germination and early seedling growth by mediating specific cytoplasmic mRNA decay of transcripts coding for the abscisic acid (ABA) biosynthetic enzymes NCED5 and NCED6, and the ABA [...] (256 aa)
         
  0.529
AT5G45320
Late embryogenesis abundant protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in inflorescence meristem, root, flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- Late embryogenesis abundant protein, group 2 (InterPro-IPR004864); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G26350.1); Has 253 Blast hits to 253 proteins in 16 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 253; Viruses - 0; [...] (198 aa)
           
  0.493
AT2G43110
U3 containing 90S pre-ribosomal complex subunit; Unknown protein; Has 212 Blast hits to 211 proteins in 96 species- Archae - 0; Bacteria - 6; Metazoa - 62; Fungi - 91; Plants - 31; Viruses - 0; Other Eukaryotes - 22 (source- NCBI BLink) (288 aa)
       
 
  0.434
AT3G19850
BTB/POZ domain-containing protein At3g19850; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (554 aa)
     
   
  0.430
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; Its function is described as cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; Involved in protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphoryl [...] (1094 aa)
     
 
  0.427
AT3G49050
Putative calmodulin-binding heat-shock protein; alpha/beta-Hydrolases superfamily protein; Its function is described as triglyceride lipase activity, calmodulin binding; Involved in lipid catabolic process, lipid metabolic process; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Lipase, class 3 (InterPro-IPR002921), Mono-/di-acylglycerol lipase, N-terminal (InterPro-IPR005592); BEST Arabidopsis thaliana protein match is- alpha/beta-Hydrolases superfamily protein (TAIR-AT4G00500.2); Has 551 Bla [...] (477 aa)
           
  0.418
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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