• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G11390 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11390" - Protein kinase superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11390Protein kinase superfamily protein; Contains the following InterPro domains- ABC-1 (InterPro-IPR004147), Protein kinase-like domain (InterPro-IPR011009); BEST Arabidopsis thaliana protein match is- Protein kinase superfamily protein (TAIR-AT1G61640.1); Has 9400 Blast hits to 9333 proteins in 1787 species- Archae - 122; Bacteria - 4339; Metazoa - 436; Fungi - 531; Plants - 684; Viruses - 14; Other Eukaryotes - 3274 (source- NCBI BLink) (624 aa)    
Predicted Functional Partners:
CHLM
Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope; Belongs to the class I-like SAM-binding methyltransferase superfamily. Magnesium protoporphyrin O- methyl [...] (312 aa)
     
 
  0.628
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family (322 aa)
     
 
  0.628
PPT1
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate. Required for embryo development; Belongs to the UbiA prenyltransferase family (429 aa)
     
 
  0.594
RRP41
Exosome complex component RRP41 homolog; Non-catalytic component of the RNA exosome complex which has 3’->5’ exoribonuclease activity and participates in a multitude of cellular RNA processing, maturation and degradation events. In vitro, is a processive phosphorolytic exonuclease and requires a single-stranded poly(A) tail on the substrate RNA for its activity. Can complement the growth defect of a yeast mutant lacking RRP41 exonuclease. Required for normal development of female gametophytes (241 aa)
           
  0.583
AT5G57300
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (288 aa)
     
 
  0.568
APG1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Involved in a key methylation step in both tocopherols (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinone (MPBQ) to 2,3-dimethyl-6- phytyl-1,4-hydroquinone (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinone (MSBQ) to plastoquinone (338 aa)
     
 
  0.566
MENG
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Involved in the biosynthesis of phylloquinone (vitamin K1). Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol (261 aa)
     
 
  0.566
AT5G60160
Zn-dependent exopeptidases superfamily protein; Its function is described as aminopeptidase activity, zinc ion binding; Involved in response to cadmium ion, proteolysis; Located in plasma membrane, vacuole; Expressed in 26 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Peptidase M18, aminopeptidase I (InterPro-IPR001948); BEST Arabidopsis thaliana protein match is- Zn-dependent exopeptidases superfamily protein (TAIR-AT5G04710.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Pla [...] (477 aa)
         
  0.517
AT5G04710
Zn-dependent exopeptidases superfamily protein; Its function is described as aminopeptidase activity, zinc ion binding; Involved in proteolysis; Located in chloroplast, vacuole; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Peptidase M18, aminopeptidase I (InterPro-IPR001948); BEST Arabidopsis thaliana protein match is- Zn-dependent exopeptidases superfamily protein (TAIR-AT5G60160.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other [...] (526 aa)
         
  0.517
AT4G34412
EKC/KEOPS complex subunit tprkb-like protein; Contains the following InterPro domains- Kinase binding protein CGI-121 (InterPro-IPR013926); Has 275 Blast hits to 275 proteins in 139 species- Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source- NCBI BLink); Belongs to the CGI121/TPRKB family (172 aa)
           
  0.499
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]