• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G11510 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11510" - DNA-binding storekeeper protein-related transcriptional regulator in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11510DNA-binding storekeeper protein-related transcriptional regulator; Contains the following InterPro domains- Protein of unknown function DUF573 (InterPro-IPR007592); BEST Arabidopsis thaliana protein match is- DNA-binding storekeeper protein-related transcriptional regulator (TAIR-AT1G61730.1); Has 6244 Blast hits to 2746 proteins in 297 species- Archae - 0; Bacteria - 3717; Metazoa - 876; Fungi - 377; Plants - 483; Viruses - 20; Other Eukaryotes - 771 (source- NCBI BLink) (352 aa)    
Predicted Functional Partners:
AT4G31270
Sequence-specific DNA binding transcription factors; BEST Arabidopsis thaliana protein match is- Homeodomain-like superfamily protein (TAIR-AT2G33550.1); Has 462 Blast hits to 461 proteins in 32 species- Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 2; Plants - 436; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (294 aa)
           
  0.952
AtHB23
Encodes a homeodomain leucine zipper class I (HD-Zip I) protein; Belongs to the HD-ZIP homeobox family. Class I subfamily (255 aa)
           
  0.903
AT1G21610
Wound-responsive family protein; May be required for replication-independent chromatin assembly; Belongs to the ubinuclein family (685 aa)
           
  0.838
AT5G52500
Uncharacterized protein At5g52500; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G57400.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (363 aa)
           
  0.778
AT4G13360
ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Its function is described as catalytic activity; Involved in metabolic process; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Crotonase, core (InterPro-IPR001753); BEST Arabidopsis thaliana protein match is- ATP-dependent caseinolytic (Clp) protease/crotonase family protein (TAIR-AT3G24360.1); Has 20226 Blast hits to 20218 proteins in 1812 species- Archae - 355; Bacteria - 13945; Metazoa - 843; Fungi - 613; Plants - 486; Viruses - 0; Other Eukaryotes - 398 [...] (421 aa)
           
  0.733
DREB26
Ethylene-responsive transcription factor ERF012; Transcriptional activator involved in the regulation of plant development and tolerance to abiotic stresses. Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity); Belongs to the AP2/ERF transcription factor family. ERF subfamily (230 aa)
           
  0.662
AT5G43420
RING/U-box superfamily protein; Its function is described as zinc ion binding; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841), Zinc finger, C3HC4 RING-type (InterPro-IPR018957); BEST Arabidopsis thaliana protein match is- RING/U-box superfamily protein (TAIR-AT1G04360.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (375 aa)
           
  0.642
ADA2B
Transcriptional adapter ADA2b; Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region. Mediates auxin and cytokinin signals in the control of cell proliferation and might be involved in repression of a freezing tolerance pathway at warm temperature (487 aa)
           
  0.636
DDF1
Dehydration-responsive element-binding protein 1F; Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosy [...] (209 aa)
           
  0.566
ADA2A
Transcriptional adapter ADA2a; Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known (By similarity). ADA2 stimulates the acetyltransferase activity of GCN5 on free histones or nucleosomes, probably by opening up the promoter region (555 aa)
           
  0.529
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]