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AT1G11630 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11630" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11630Pentatricopeptide repeat-containing protein (405 aa)    
Predicted Functional Partners:
AT3G52260
RNA pseudourine synthase 5 (416 aa)
     
        0.471
SURF1
SURFEIT 1; Probably involved in the biogenesis of the COX complex (354 aa)
     
   
  0.449
AT1G48510
Surfeit locus 1 cytochrome c oxidase biogenesis protein; May be involved in the biogenesis of the COX complex (384 aa)
     
   
  0.449
TBL23
TRICHOME BIREFRINGENCE-LIKE 23; May be involved in the specific O-acetylation of cell wall polymers (432 aa)
     
        0.438
AT1G76280
Pentatricopeptide repeat-containing protein (801 aa)
     
        0.438
AT1G52630
O-fucosyltransferase family protein (439 aa)
     
        0.438
AT1G10330
Pentatricopeptide repeat-containing protein (467 aa)
     
        0.438
AT5G39940
FAD/NAD(P)-binding oxidoreductase family protein (480 aa)
     
        0.437
SSE1
Peroxin-16; Involved in the formation of peroxisomes, lipid bodies and protein bodies (367 aa)
     
        0.437
AT2G32840
Proline-rich family protein (337 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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