STRINGSTRING
AT1G11740 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11740" - Ankyrin repeat family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11740Ankyrin repeat family protein (644 aa)    
Predicted Functional Partners:
AT1G69800
Cystathionine beta-synthase (CBS) protein; Regulatory subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants (476 aa)
     
   
  0.686
AT4G24860
AAA-type ATPase family protein (1122 aa)
       
 
  0.677
AT5G66050
Wound-responsive family protein (340 aa)
           
  0.676
AT5G27810
MADS-box transcription factor family protein (119 aa)
           
  0.676
AT5G24830
Pentatricopeptide repeat-containing protein (593 aa)
           
  0.676
AT3G10750
FBD domain family (299 aa)
           
  0.676
AT3G01210
RNA recognition motif-containing protein (249 aa)
           
  0.676
AT1G53690
DNA directed RNA polymerase-7 subunit (61 aa)
           
  0.676
AT1G19380
Uncharacterized protein (147 aa)
           
  0.676
AT1G01320
Tetratricopeptide repeat-containing protein (1797 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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