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AT1G11925 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11925" - Stigma-specific stig1-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11925Stigma-specific stig1-like protein (140 aa)    
Predicted Functional Partners:
AT2G19340
Oligosaccharyltransferase complex/magnesium transporter family protein (200 aa)
           
  0.868
AT5G28237
Tryptophan synthase beta chain (465 aa)
     
   
  0.856
AT4G25300
Protein SRG1 (356 aa)
           
  0.846
AT1G69980
Uncharacterized protein (205 aa)
           
  0.810
NRPB5
DNA-directed RNA polymerase II subunit E; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Component of RNA polymerase IV which mediates short- interfering RNAs (siRNA) accumulation and subsequent RNA-directed DNA methylation-dependent (RdDM) transcri [...] (205 aa)
           
  0.709
AT1G32980
Subtilisin-like serine endopeptidase family protein (190 aa)
           
  0.703
AT3G14380
Uncharacterized protein; Involved in floral organ shedding (178 aa)
           
  0.676
CPK25
Calcium-dependent protein kinase 25; May play a role in signal transduction pathways that involve calcium as a second messenger (520 aa)
           
  0.671
CYP71B31
Cytochrome P450 71B31 (498 aa)
           
  0.670
AT2G19880
Nucleotide-diphospho-sugar transferases superfamily protein (520 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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