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AT1G11960 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G11960" - Putative ERD4 protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G11960Putative ERD4 protein; Acts as an osmosensitive calcium-permeable cation channel (771 aa)    
Predicted Functional Partners:
AT1G23710
Uncharacterized protein (295 aa)
           
  0.673
AT4G35320
Uncharacterized protein (147 aa)
           
  0.670
RbcX1
Chaperonin-like RbcX protein (174 aa)
           
  0.670
AT2G28400
Uncharacterized protein (162 aa)
           
  0.670
AT1G10410
Uncharacterized protein (485 aa)
           
  0.631
AT2G32210
Uncharacterized protein (71 aa)
           
  0.609
AT4G33980
Uncharacterized protein (232 aa)
           
  0.607
ERD7
EARLY-RESPONSIVE TO DEHYDRATION 7 (452 aa)
     
   
  0.596
CYP706A1
Member of CYP706A (557 aa)
           
  0.557
AT5G62350
Plant invertase/pectin methylesterase inhibitor superfamily protein (202 aa)
           
  0.554
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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