• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ELP protein (Arabidopsis thaliana) - STRING interaction network
"ELP" - Extensin-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELPExtensin-like protein (ELP) (137 aa)    
Predicted Functional Partners:
AT5G05960
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in 18 plant structures; Expressed during 10 growth stages; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612); BEST Arabidopsis thaliana protein match is- Bifunctional inhibitor/lipid-transfer protein/seed storage [...] (116 aa)
            
  0.967
AT2G18370
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15 (116 aa)
            
  0.900
AT3G22620
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in chloroplast envelope; Expressed in 9 plant structures; Expressed during 4 anthesis, C globular stage, petal differentiation and expansion stage; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612); BEST Arabidopsis thaliana protein match is- Bifu [...] (203 aa)
            
  0.894
AT4G33550
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in 15 plant structures; Expressed during 6 growth stages; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612); BEST Arabidopsis thaliana protein match is- Bifunctional inhibitor/lipid-transfer protein/seed storage 2 [...] (130 aa)
            
  0.839
AT4G08530
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15 (103 aa)
            
  0.838
LTP4
Non-specific lipid-transfer protein 4; Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g5 [...] (112 aa)
            
  0.670
LTP3
Non-specific lipid-transfer protein 3; Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15 (115 aa)
            
  0.660
AT1G09640
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (414 aa)
            
  0.607
GASA1
Gibberellin-regulated protein 1; Gibberellin-regulated protein that may function in hormonal controlled steps of development such as seed germination, flowering and seed maturation; Belongs to the GASA family (98 aa)
      
   
  0.577
ELIP2
Early light-induced protein 2, chloroplastic; Probably involved in the integration of pigments into the mature light-harvesting pigment-protein complexes. Light- harvesting chlorophyll (LHC) a/b-binding protein required to ensure a high rate of chlorophyll accumulation during deetiolation in continuous high light. Involved in seed germination. May fulfill a photoprotective functions. Prevents excess accumulation of free chlorophyll by inhibiting the entire chlorophyll biosynthesis pathway (e.g. 5-aminolevulinate synthesis and Mg- protoporphyrin IX chelatase activity), and hence prevent [...] (193 aa)
            
  0.575
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >