STRINGSTRING
AT1G12170 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12170" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G12170F-box family protein (364 aa)    
Predicted Functional Partners:
AT1G27090
Glycine-rich protein (420 aa)
           
  0.868
AT1G80940
Uncharacterized protein (213 aa)
           
  0.863
AT2G27090
Uncharacterized protein (743 aa)
           
  0.860
AT2G15240
UNC-50-like protein (252 aa)
           
  0.849
AT2G16530
Putative polyprenol reductase 2; Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism (By similarity) (343 aa)
           
  0.808
AT5G41720
Uncharacterized protein (187 aa)
     
 
    0.730
AT3G59610
F-box/kelch-repeat protein (521 aa)
     
 
 
0.730
AT3G42830
RING-box protein 1; Component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex, which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. The SCF complex plays a crucial role in regulating response to auxin and is essential for growth and development. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme, to the complex and brings it into close proximity to the substrate (By similarity) (115 aa)
     
 
    0.730
AT3G22421
F-box and associated interaction domain-containing protein (426 aa)
     
 
 
0.730
AT3G21410
F-box/WD-40 repeat-containing protein 1 (410 aa)
     
 
 
0.730
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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