STRINGSTRING
AT1G12390 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12390" - Protein cornichon-4 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G12390Protein cornichon-4 (137 aa)    
Predicted Functional Partners:
AT1G20430
Uncharacterized protein (116 aa)
           
  0.956
AT2G17710
Uncharacterized protein (152 aa)
           
  0.864
PHT4;6
Phosphate transporter 4;6; Inorganic phosphate and probable anion transporter (432 aa)
           
  0.670
NHX8
Na+/H+ exchanger 8; May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity (By similarity) (756 aa)
       
 
  0.617
VAP27-1
Vesicle associated protein; Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules (256 aa)
     
      0.601
THI2.2
Thionin 2.2; Thionins are small plant proteins which are toxic to animal cells. They seem to exert their toxic effect at the level of the cell membrane. Their precise function is not known (134 aa)
           
  0.600
NLM1
Aquaporin NIP1-1; Water channel probably required to promote glycerol permeability and water transport across cell membranes (296 aa)
       
      0.589
NAC089
NAC domain containing protein 89; Transcription factor involved in plant cell division (340 aa)
       
      0.588
AT1G27300
Uncharacterized protein (200 aa)
       
      0.588
NHX6
Na+/H+ antiporter 6; Involved in trafficking to the vacuole. Required for cell proliferation and cell expansion, but not for cell differentiation. May act in low affinity electroneutral exchange of protons for cations such as Na(+) or K(+) across membranes. May also exchange Li(+) and Cs(+) with a lower affinity (By similarity) (535 aa)
       
 
  0.569
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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