STRINGSTRING
AT1G12423 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12423" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G12423Uncharacterized protein (39 aa)    
Predicted Functional Partners:
AT4G08151
Uncharacterized protein (38 aa)
     
        0.437
AT3G42560
Pentatricopeptide repeat (PPR) superfamily protein (98 aa)
     
        0.437
AT1G62863
Uncharacterized protein (55 aa)
     
        0.437
AT1G35461
Uncharacterized protein (46 aa)
     
        0.437
AT1G04684
Uncharacterized protein (49 aa)
     
        0.437
AT5G50500
Uncharacterized protein (135 aa)
     
        0.436
AT5G44470
Uncharacterized protein (108 aa)
     
        0.436
AT5G37900
TRAF-like superfamily protein (241 aa)
     
        0.436
AT5G35540
Uncharacterized protein (189 aa)
     
        0.436
AT5G28620
Protein kinase C-related (130 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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