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AT1G12540 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12540" - Basic helix-loop-helix domain-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G12540Basic helix-loop-helix domain-containing protein (257 aa)    
Predicted Functional Partners:
KT5
K+ transporter 5; Probable potassium channel. May interact with the cytoskeleton or with regulatory proteins (By similarity) (880 aa)
           
  0.606
SPIK
Shaker pollen inward K+ channel; Highly selective inward-rectifying potassium channel that could mediate potassium uptake in the pollen membrane. Plays an important role in pollen tube development. Assuming opened or closed conformations in response to the voltage difference across the membrane, the channel is activated by hyperpolarization. May interact with the cytoskeleton or with regulatory proteins (888 aa)
           
  0.551
MAML-4
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate). Involved in Leu biosynthesis, but do not participate in the chain elongation of glucosinolates (631 aa)
           
  0.474
F3H
Flavanone 3-hydroxylase; Catalyzes the 3-beta-hydroxylation of 2S-flavanones to 2R,3R-dihydroflavonols which are intermediates in the biosynthesis of flavonols, anthocyanidins, catechins and proanthocyanidins in plants (358 aa)
           
  0.470
UGT80B1
Sterol 3beta-glucosyltransferase; Involved in the biosynthesis of sterol glucosides. Catalyzes the synthesis of steryl glycosides (SGs) and acyl steryl glycosides (ASGs) which are the most abundant sterol derivatives in higher plants. Can act on several sterols like sitosterol, campesterol and stigmasterol. Is required for embryonic development, seed suberin accumulation, cutin formation and flavanoid accumulation in the seed coat. Both UGT80A2 and UGT80B1 are required for the normal production of SGs and ASGs in seeds (615 aa)
           
  0.449
AT5G08630
DDT domain-containing protein (723 aa)
           
  0.448
KAT3
Potassium channel KAT3; Probable modulatory (alpha) subunit of inward-rectifying potassium channels. Could mediate potassium uptake from the soil solution by plant roots in association with AKT1 (662 aa)
           
  0.445
WRKY61
WRKY DNA-binding protein 61; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (480 aa)
           
  0.445
AT5G52790
CBS domain-containing protein with a domain of unknown function (DUF21) (500 aa)
           
  0.442
TT1
Transparent testa 1; May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat (PubMed-21477081). Plays a role in the regulatory network controlling flavonoid accumulation in endothelium cells during seed development (PubMed-21477081) (303 aa)
           
  0.430
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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