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AT1G12630 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12630" - Ethylene-responsive transcription factor ERF027 in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G12630Ethylene-responsive transcription factor ERF027; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (192 aa)    
Predicted Functional Partners:
AT3G13180
NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein; Its function is described as RNA binding; Involved in regulation of transcription, DNA-dependent; Located in chloroplast; Expressed in 19 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro-IPR001678), NusB/RsmB/TIM44 (InterPro-IPR006027); BEST Arabidopsis thaliana protein match is- S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR-AT5G55920.1); Has 10280 Blast hits to 10234 pr [...] (523 aa)
           
  0.649
HSFB3
Heat stress transcription factor B-3; Transcriptional regulator that specifically binds DNA sequence 5’-AGAAnnTTCT-3’ known as heat shock promoter elements (HSE); Belongs to the HSF family. Class B subfamily (244 aa)
 
       
  0.646
HSFA6B
Heat stress transcription factor A-6b; Transcriptional activator that specifically binds DNA sequence 5’-AGAAnnTTCT-3’ known as heat shock promoter elements (HSE) (406 aa)
           
  0.571
AT-HSFB2B
Winged-helix DNA-binding transcription factor family protein; Transcriptional regulator that specifically binds DNA sequence 5’-AGAAnnTTCT-3’ known as heat shock promoter elements (HSE) (377 aa)
 
       
  0.555
TGA3
Transcription factor TGA3; Transcriptional activator that binds specifically to the DNA sequence 5’-TGACG-3’. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Required to induce the systemic acquired resistance (SAR) via the regulation of pathogenesis-related genes expression. Binding to the as-1 element of PR-1 promoter is salicylic acid- inducible and mediated by NPR1. Could also bind to the Hex-motif (5’-TGACGTGG-3’) another cis-acting element fou [...] (384 aa)
           
  0.527
AT4G39690
Uncharacterized protein At4g39690; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Expressed in 26 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Mitochondrial inner membrane protein Mitofilin (InterPro-IPR019133); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink); Belongs to the MICOS complex subunit Mic60 family (650 aa)
           
  0.495
RPL23AB
60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA (154 aa)
           
  0.495
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Its function is described as lipid binding; Involved in lipid transport; Located in endomembrane system; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro-IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro-IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro-IPR013770); BEST Arabidopsis [...] (96 aa)
           
  0.495
AT4G34215
Probable carbohydrate esterase At4g34215; Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds; Belongs to the carbohydrate esterase 6 family (260 aa)
           
  0.493
AT3G53010
Carbohydrate esterase, putative (DUF303); Domain of unknown function (DUF303) ; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Protein of unknown function DUF303, acetylesterase putative (InterPro-IPR005181); BEST Arabidopsis thaliana protein match is- Domain of unknown function (DUF303) (TAIR-AT4G34215.2); Has 339 Blast hits to 339 proteins in 106 species- Archae - 2; Bacteria - 221; Metazoa - 0; Fungi - 1; Plants - 86; Viruses - 0; Other Eukaryotes - 29 (source- [...] (297 aa)
           
  0.493
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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