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EMB1586 protein (Arabidopsis thaliana) - STRING interaction network
"EMB1586" - Embryo defective 1586 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
EMB1586Embryo defective 1586; Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation (551 aa)    
Predicted Functional Partners:
EMB25
EMBRYO DEFECTIVE 25; RNA helicase involved in group II intron splicing (PubMed-26147377). Essential protein required during embryogenesis. Involved in post-transcriptional gene silencing. Modulates the determination of cell fate. Necessary for normal plasmodesmata (PD) development and aperture regulation (1171 aa)
     
 
  0.978
AT3G26560
ATP-dependent RNA helicase, putative; May be involved in pre-mRNA splicing (1168 aa)
   
 
  0.971
MAGO
MAGO NASHI (150 aa)
     
 
  0.967
Y14
RNA-binding protein 8A (202 aa)
     
 
  0.947
AT4G30680
Initiation factor eIF-4 gamma, MA3 (263 aa)
     
  0.943
eIFiso4G1
MIF4G domain and MA3 domain-containing protein; Plays a role in the accumulation of some potyvirus during viral infection (780 aa)
     
  0.941
AT1G62410
MIF4G domain-containing protein (223 aa)
     
  0.941
UPF3
Smg-4/UPF3-like protein; Recruits UPF2 at the cytoplasmic side of the nuclear envelope and the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex (including UPF1 bound to release factors at the stalled ribosome) is believed to activate NMD. Binds spliced mRNA upstream of exon-exon junctions (By similarity). Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons (premature termination codon PTC) by associating with the nuclear exon junction complex (EJC) and serving as link between the EJC core and NMD machinery. Eliminates the production of nons [...] (484 aa)
       
 
  0.937
AT1G80930
pre-mRNA-splicing factor CWC22 (900 aa)
     
 
  0.879
AT1G52325
Initiation factor eIF-4 gamma, MA3 (145 aa)
     
 
  0.879
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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