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AT1G12960 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G12960" - Large subunit ribosomal protein L27Ae in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G12960Large subunit ribosomal protein L27Ae (104 aa)    
Predicted Functional Partners:
AT5G02960
40S ribosomal protein S23-2 (142 aa)
   
  0.999
AT3G09680
40S ribosomal protein S23-1 (142 aa)
   
  0.999
RPL10B
Ribosomal protein L10 B (221 aa)
   
  0.999
AT4G36130
60S ribosomal protein L8-3 (258 aa)
   
  0.999
AT3G51190
60S ribosomal protein L8-2 (260 aa)
   
  0.999
EMB2296
Embryo defective 2296 (258 aa)
   
  0.999
AT5G35530
40S ribosomal protein S3-3 (248 aa)
   
  0.999
AT3G53870
40S ribosomal protein S3-2 (249 aa)
   
  0.999
AT2G31610
40S ribosomal protein S3-1 (250 aa)
   
  0.999
AT5G63070
40S ribosomal protein S15-6 (160 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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