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AT1G13160 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13160" - Uncharacterized protein At1g13160 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G13160Uncharacterized protein At1g13160; ARM repeat superfamily protein; Its function is described as binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 20 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Domain of unknown function, nucleolar NUC130/133, N-terminal (InterPro-IPR012977), Armadillo-type fold (InterPro-IPR016024), SDA1 (InterPro-IPR007949); BEST Arabidopsis thaliana protein match is- SDA1 family protein (TAIR-AT4G31520.1); Has 29206 Blast hits to 13573 proteins in 931 species- Archae [...] (804 aa)    
Predicted Functional Partners:
AT2G18220
Nucleolar complex protein 2 homolog; Noc2p family; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Uncharacterised protein family UPF0120 (InterPro-IPR005343); BEST Arabidopsis thaliana protein match is- Noc2p family (TAIR-AT3G55510.1); Has 4709 Blast hits to 3397 proteins in 331 species- Archae - 4; Bacteria - 179; Metazoa - 1693; Fungi - 681; Plants - 249; Viruses - 70; Other Eukaryotes - 1833 (source- NCBI BLink) (764 aa)
     
 
  0.994
CPR
Metallopeptidase M24 family protein; Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Required for expression of cell cycle genes such as CYCD3-1, RNR2A and CDKB1-1. Promotes, in a dose- and auxin- dependent manner, organ growth by stimulating both cell proliferation and expansion, via the regulation of RBR1 levels; Belongs to the peptidase M24 family (401 aa)
     
 
  0.994
AT1G67120
ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits. Functions at successive maturation steps to remove ribosomal factors at critical transition points, first driving the exit of early pre-60S particles from the nucleolus and then driving late pre-60S particles from the nucleus (By similarity). Required for female gametophyte development. Involved in the expression regulation of genes related to plant growth and development; Belongs to the midasin family (5393 aa)
     
 
  0.993
AT1G25260
Ribosomal protein L10 family protein; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes (235 aa)
     
 
  0.993
AT5G06360
Ribosomal protein S8e family protein; Contains the following InterPro domains- Ribosomal protein S8e/ribosomal biogenesis NSA2= (InterPro-IPR022309); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (260 aa)
     
 
  0.992
AT5G52820
WD-40 repeat family protein / notchless protein, putative; Required for female gametophyte development; Belongs to the NLE1/RSA4 family (473 aa)
     
 
  0.992
REBELOTE
Uncharacterized protein At3g55510; REBELOTE (RBL); Involved in floral meristem determinacy; Located in nucleus; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Uncharacterised protein family UPF0120 (InterPro-IPR005343); BEST Arabidopsis thaliana protein match is- Noc2p family (TAIR-AT2G18220.1); Has 382 Blast hits to 364 proteins in 176 species- Archae - 0; Bacteria - 0; Metazoa - 117; Fungi - 131; Plants - 77; Viruses - 0; Other Eukaryotes - 57 (source- NCBI BLink) (594 aa)
     
 
  0.992
RID3
Transducin/WD40 repeat-like superfamily protein; Involved in meristem development. Acts as negative regulator of the CUC-STM pathway in shoot apical meristem (SAM) neo-formation (438 aa)
     
 
  0.990
AT1G50920
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (671 aa)
     
 
  0.989
AtNug2
GTP-binding family protein; GTPase involved in pre-60S ribosomal subunit maturation (576 aa)
     
 
  0.989
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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