STRINGSTRING
RTFL17 protein (Arabidopsis thaliana) - STRING interaction network
"RTFL17" - ROTUNDIFOLIA like 17 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTFL17ROTUNDIFOLIA like 17 (41 aa)    
Predicted Functional Partners:
RTFL8
ROTUNDIFOLIA like 8 (87 aa)
     
   
  0.967
RTFL7
ROTUNDIFOLIA like 7 (79 aa)
           
  0.960
ROT4
ROTUNDIFOLIA4 (53 aa)
           
  0.670
AT4G26410
Uncharacterized protein (263 aa)
           
  0.509
ZWI
ZWICHEL; Minus-end microtubule-dependent motor protein involved in the regulation of cell division and trichome morphogenesis. Possesses basal and microtubule-stimulated ATPase activities (1266 aa)
           
  0.507
KAK
KAKTUS; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes (1888 aa)
           
  0.491
CPSF73-II
Cleavage and polyadenylation specificity factor subunit 3-II; Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3’-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. May function as mRNA 3’-end- processing endonuclease and also be involved in the histone 3’-end pre-mRNA processing (613 aa)
           
  0.475
AT2G28390
SAND family protein (607 aa)
           
  0.473
AT4G34270
TIP41-like protein (290 aa)
           
  0.447
STI
STICHEL; Acts as a key regulator of trichome branching through an endoreduplication-independent pathway (1218 aa)
           
  0.424
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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