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MAP1C protein (Arabidopsis thaliana) - STRING interaction network
"MAP1C" - Methionine aminopeptidase 1B, chloroplastic in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
MAP1CMethionine aminopeptidase 1B, chloroplastic; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily (369 aa)    
Predicted Functional Partners:
MAP2B
Methionine aminopeptidase 2B; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (439 aa)
     
 
  0.979
MAP2A
Methionine aminopeptidase 2A; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (441 aa)
     
 
  0.973
AT5G03710
Replication factor C large subunit; Unknown protein; Has 416500 Blast hits to 48146 proteins in 2280 species- Archae - 1297; Bacteria - 27453; Metazoa - 153504; Fungi - 46991; Plants - 20421; Viruses - 6609; Other Eukaryotes - 160225 (source- NCBI BLink) (81 aa)
           
  0.951
AT1G48400
F-box/RNI-like/FBD-like domains-containing protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), FBD-like (InterPro-IPR006566), F-box domain, Skp2-like (InterPro-IPR022364); BEST Arabidopsis thaliana protein match is- RNI-like superfamily protein (TAIR-AT1G48390.1); Has 116287 Blast hits to 17670 proteins in 977 species- Archae - 853; Bacteria - 43940; Metazoa - 20597; Fungi - 11169; Plants - 7279; Viruses - 1793; Other Eukaryotes - 30656 (source- NCBI BLink) (513 aa)
           
  0.951
AT1G47300
F-box family protein; Contains the following InterPro domains- F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364); BEST Arabidopsis thaliana protein match is- F-box and associated interaction domains-containing protein (TAIR-AT1G47340.1); Has 59778 Blast hits to 14921 proteins in 727 species- Archae - 194; Bacteria - 1073; Metazoa - 27367; Fungi - 4962; Plants - 3675; Viruses - 1555; Other Eukaryotes - 20952 (source- NCBI BLink) (306 aa)
           
  0.951
PAO5
Probable polyamine oxidase 5; Flavoenzyme that catalyzes the oxidation of the secondary amino group of polyamines (533 aa)
     
        0.897
CPR
Metallopeptidase M24 family protein; Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Required for expression of cell cycle genes such as CYCD3-1, RNR2A and CDKB1-1. Promotes, in a dose- and auxin- dependent manner, organ growth by stimulating both cell proliferation and expansion, via the regulation of RBR1 levels; Belongs to the peptidase M24 family (401 aa)
     
   
  0.867
PDF1B
Peptide deformylase 1B, chloroplastic/mitochondrial; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Has a preferred substrate specificity towards the photosystem II (PS II) D1 polypeptide (273 aa)
   
   
  0.858
PTAC17
Plastid transcriptionally active 17 (PTAC17); Located in plastid chromosome, chloroplast stroma, chloroplast, nucleoid; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro-IPR003495), Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro-IPR011629); BEST Arabidopsis thaliana protein match is- Cobalamin biosynthesis CobW-like protein (TAIR-AT1G15730.1); Has 22612 Blast hits to 14499 proteins in 1972 species- Archae - 190; Bacteria - 10146; Metazoa - 2946; Fun [...] (444 aa)
     
      0.841
PDF1A
Encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis (269 aa)
   
   
  0.820
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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