STRINGSTRING
T6J4.6 protein (Arabidopsis thaliana) - STRING interaction network
"T6J4.6" - Myb-like transcription factor family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T6J4.6Myb-like transcription factor family protein (344 aa)    
Predicted Functional Partners:
AT5G26010
Putative protein phosphatase 2C 72 (331 aa)
     
   
  0.625
AT3G47980
Integral membrane HPP family protein (252 aa)
     
   
  0.618
AT5G27930
Putative protein phosphatase 2C 73 (373 aa)
           
  0.609
AT2G40435
Uncharacterized protein (158 aa)
           
  0.607
AT1G03440
Leucine-rich repeat-containing protein (397 aa)
           
  0.607
AT5G09800
ARM repeat superfamily protein; Functions as an E3 ubiquitin ligase (409 aa)
           
  0.559
LBD38
LOB domain-containing protein 38 (247 aa)
     
   
  0.558
AT3G16560
Putative protein phosphatase 2C 40 (493 aa)
           
  0.554
RL4
RAD-like 4; Probable transcription factor (77 aa)
           
  0.552
AT1G76350
RWP-RK domain-containing protein; Probable transcription factor (808 aa)
           
  0.552
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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