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AT1G13310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13310" - Endosomal targeting BRO1-like domain-containing protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13310Endosomal targeting BRO1-like domain-containing protein (374 aa)    
Predicted Functional Partners:
AT5G37380
Chaperone DnaJ-domain containing protein (431 aa)
           
  0.861
AT1G73390
Endosomal targeting BRO1-like domain-containing protein (419 aa)
           
  0.861
AT1G49330
Hydroxyproline-rich glycoprotein (331 aa)
           
  0.861
CHX25
cation/H+ exchanger 25; May operate as a cation/H(+) antiporter (857 aa)
           
  0.735
AT3G62510
Protein disulfide isomerase-related (93 aa)
           
  0.731
MAPKKK5
Member of MEKK subfamily (716 aa)
           
  0.631
VAMP726
Vesicle-associated membrane protein 72; Involved in the targeting and/or fusion of transport vesicles to their target membrane (220 aa)
           
  0.602
FUT2
Fucosyltransferase 2; May be involved in cell wall biosynthesis. May act as a fucosyltransferase (539 aa)
           
  0.601
AT1G72430
SAUR-like auxin-responsive protein family (119 aa)
           
  0.601
FBX2
F-box protein 2 (539 aa)
           
  0.600
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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