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AT1G13380 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13380" - Protein of unknown function in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
AT1G13380Protein of unknown function (DUF1218); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF1218 (InterPro-IPR009606); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF1218) (TAIR-AT4G27435.1); Has 523 Blast hits to 523 proteins in 97 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 523; Viruses - 0; Other Eukaryotes - 0 (sourc [...] (188 aa)    
Predicted Functional Partners:
CSD2
Superoxide dismutase [Cu-Zn] 2, chloroplastic; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Mediates tolerance to stress, including photo-oxidative stress (216 aa)
           
  0.738
CSD3
Copper/zinc superoxide dismutase 3; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (164 aa)
           
  0.545
CSD1
Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress; Belongs to the Cu-Zn superoxide dismutase family (152 aa)
           
  0.545
CEN1
Probable calcium-binding protein CML20; Potential calcium sensor (169 aa)
           
  0.527
PMT5
Polyol/monosaccharide transporter 5; This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (<i>myo</i>-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily (539 aa)
           
  0.438
AT2G20780
Major facilitator superfamily protein; Plasma membrane sugar-proton symporter (526 aa)
           
  0.438
PMT2
Polyol/monosaccharide transporter 2; Plasma membrane sugar-proton symporter (511 aa)
           
  0.438
PMT1
Polyol/monosaccharide transporter 1; Plasma membrane sugar-proton symporter (511 aa)
           
  0.438
SWEET7
Bidirectional sugar transporter SWEET7; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane; Belongs to the SWEET sugar transporter family (258 aa)
           
  0.434
SWEET6
Bidirectional sugar transporter SWEET6; Mediates both low-affinity uptake and efflux of sugar across the plasma membrane (261 aa)
           
  0.434
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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