STRINGSTRING
AT1G13480 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13480" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13480Uncharacterized protein (387 aa)    
Predicted Functional Partners:
AT4G28460
Uncharacterized protein (72 aa)
     
        0.447
AT5G46013
Uncharacterized protein (49 aa)
     
        0.438
AT5G24040
Uncharacterized protein (373 aa)
     
        0.438
AT4G02170
Uncharacterized protein (171 aa)
     
        0.438
PP2-B6
Phloem protein 2-B6 (307 aa)
     
        0.438
AT1G44130
Aspartyl protease-like protein (405 aa)
     
        0.438
AT1G16230
Syntaxin of plants SYP5 (193 aa)
     
        0.438
AT5G52050
MATE efflux family protein; Functions as a multidrug and toxin extrusion transporter in the export of abscisic acid (ABA) in guard cells. Plays a role in ABA-mediated growth inhibition and responses to drought conditions (PubMed-24851876). May act as a negative regulator of hypocotyl cell elongation in the light (PubMed-26160579) (505 aa)
     
        0.437
BHLH92
Transcription factor bHLH92 (247 aa)
     
        0.437
AT5G09876
Uncharacterized protein (105 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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