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STRINGSTRING
AT1G13510 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13510" - Protein of unknown function in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
AT1G13510Protein of unknown function (DUF1262); Contains the following InterPro domains- Protein of unknown function DUF1262 (InterPro-IPR010683); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF1262) (TAIR-AT1G13540.1); Has 101 Blast hits to 94 proteins in 9 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (380 aa)    
Predicted Functional Partners:
AT2G28960
Probable LRR receptor-like serine/threonine-protein kinase At2g28960; Leucine-rich repeat protein kinase family protein; Its function is described as protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; Involved in protein amino acid phosphorylation; Located in endomembrane system; Expressed in 6 plant structures; Expressed during 4 anthesis, C globular stage; Contains the following InterPro domains- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, catalytic domain (InterPro-IPR000719), Serine/threonine-protein kinase-li [...] (880 aa)
     
        0.405
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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