STRINGSTRING
AT1G13520 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13520" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13520Uncharacterized protein (387 aa)    
Predicted Functional Partners:
GSTU10
Glutathione S-transferase TAU 10; May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides (232 aa)
     
        0.456
GLR2.5
Glutamate receptor 2.5; Glutamate-gated receptor that probably acts as non- selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells (829 aa)
     
        0.440
AT5G42830
HXXXD-type acyl-transferase-like protein (450 aa)
     
        0.412
WRKY75
WRKY DNA-binding protein 75; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (145 aa)
     
        0.400
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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