STRINGSTRING
AT1G13605 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13605" - Defensin-like protein 268 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13605Defensin-like protein 268 (103 aa)    
Predicted Functional Partners:
AT5G62623
Putative defensin-like protein 264 (88 aa)
     
        0.438
AT5G55131
Putative defensin-like protein 84 (87 aa)
     
        0.438
AT5G51105
Uncharacterized protein (123 aa)
     
        0.438
LCR12
Putative defensin-like protein 165 (84 aa)
     
        0.438
AT5G46320
MADS-box family protein (118 aa)
     
        0.438
AT5G27238
Self-incompatibility S1 family protein (135 aa)
     
        0.438
UMAMIT15
Nodulin MtN21-like transporter family protein (377 aa)
     
        0.438
CYP96A2
Member of CYP96A (506 aa)
     
        0.438
AT4G32105
Beta-1,3-N-Acetylglucosaminyltransferase family protein (124 aa)
     
        0.438
LCR23
Putative defensin-like protein 158 (77 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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