STRINGSTRING
AT1G13607 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13607" - Defensin-like protein 286 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13607Defensin-like protein 286 (72 aa)    
Predicted Functional Partners:
AT5G65370
ENTH/ANTH/VHS superfamily protein (295 aa)
     
        0.438
AT5G63250
Carbohydrate-binding X8 domain-containing protein (132 aa)
     
        0.438
AT5G48980
F-box/kelch-repeat protein (399 aa)
     
        0.438
AT5G42910
Abscisic acid-insensitive 5-like protein 8; Could participate in abscisic acid-regulated gene expression (370 aa)
     
        0.438
MYB22
Myb domain protein 22 (256 aa)
     
        0.438
AT5G40155
Defensin-like protein 313 (81 aa)
     
        0.438
AT5G36680.1
Uncharacterized protein (333 aa)
     
        0.438
AT5G22791
F-box family protein (355 aa)
     
        0.438
AT5G22150
Uncharacterized protein (330 aa)
     
        0.438
AT5G19172
Defensin-like protein 49 (84 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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