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STRINGSTRING
AT1G13610 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13610" - alpha/beta-Hydrolases superfamily protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AT1G13610alpha/beta-Hydrolases superfamily protein; Expressed in cotyledon, hypocotyl, root; Contains the following InterPro domains- Alpha/beta hydrolase fold-1 (InterPro-IPR000073); BEST Arabidopsis thaliana protein match is- alpha/beta-Hydrolases superfamily protein (TAIR-AT3G30380.2); Has 4490 Blast hits to 4478 proteins in 963 species- Archae - 8; Bacteria - 1669; Metazoa - 672; Fungi - 266; Plants - 333; Viruses - 11; Other Eukaryotes - 1531 (source- NCBI BLink) (358 aa)
 
Sorry, there are no predicted associations at the current settings.
 
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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