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AT1G13755 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G13755" - Defensin-like protein 260 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G13755Defensin-like protein 260 (119 aa)    
Predicted Functional Partners:
AT5G54530
Uncharacterized protein (161 aa)
     
        0.438
AT5G53100
NAD(P)-binding Rossmann-fold superfamily protein (364 aa)
     
        0.438
PPI3A
Uncharacterized protein; May regulate plasma membrane ATPase activity (576 aa)
     
        0.438
AT5G36690
Uncharacterized protein (576 aa)
     
        0.438
AT5G28000
SRPBCC ligand-binding domain-containing protein (164 aa)
     
        0.438
AT5G24316
Proline-rich family protein (125 aa)
     
        0.438
MYB56
Myb domain protein 56 (323 aa)
     
        0.438
HDG9
Homeodomain GLABROUS 9; Probable transcription factor that binds to the DNA sequence 5’-GCATTAAATGCGCA-3’ (718 aa)
     
        0.438
AT5G13600
Phototropic-responsive NPH3 family protein; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (591 aa)
     
        0.438
ARI16
ARIADNE 16; Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin- conjugating enzymes and then transfers it to substrates (500 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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