STRINGSTRING
ELF5A-1 protein (Arabidopsis thaliana) - STRING interaction network
"ELF5A-1" - Eukaryotic elongation factor 5A-1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELF5A-1Eukaryotic elongation factor 5A-1; The precise role of eIF-5A in protein biosynthesis is not known but it may function as a bimodular protein capable of binding to both RNA and proteins. Involved in xylogenesis (158 aa)    
Predicted Functional Partners:
DHS
Deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. Also able to produce homospermidine from putrescine (By similarity) (368 aa)
   
  0.998
AT4G17390
60S ribosomal protein L15-2 (204 aa)
     
   
  0.990
AT4G16720
60S ribosomal protein L15-1 (204 aa)
     
   
  0.990
AT3G58180
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (314 aa)
     
  0.986
AT3G59540.1
60S ribosomal protein L38 (69 aa)
     
        0.985
AT2G43460
60S ribosomal protein L38 (69 aa)
     
        0.985
AT3G57490
40S ribosomal protein S2-4 (276 aa)
     
 
  0.936
AT2G41840
40S ribosomal protein S2-3 (285 aa)
     
 
  0.936
EMB3113
EMBRYO DEFECTIVE 3113; Binds directly to 16S ribosomal RNA (303 aa)
     
 
  0.936
AT1G59359.1
40S ribosomal protein S2-2 (284 aa)
     
 
  0.936
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]