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AT1G14060 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14060" - GCK domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14060GCK domain-containing protein (179 aa)    
Predicted Functional Partners:
AT2G19385
Zinc ion binding (275 aa)
     
        0.612
AT1G52930
Ribosomal RNA processing Brix domain protein (320 aa)
     
        0.608
HDA3
Histone deacetylase 3; Probably mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Required for histone H3 ’Lys-9’ deacetylation. Involved in rRNA gene silencing in nucleolar dominance. Seems to be implicated in the regulation of genes involved in seeds development (245 aa)
     
        0.572
AT2G37990
Ribosome biogenesis regulatory protein-like protein; Involved in ribosome biogenesis (318 aa)
     
        0.567
AT5G02050
Mitochondrial glycoprotein family protein (267 aa)
     
        0.566
AT5G62440
Uncharacterized protein (202 aa)
     
        0.540
AT1G08580
Uncharacterized protein (123 aa)
     
        0.540
AT3G13230
RNA-binding protein PNO1 (215 aa)
     
        0.524
IMP4
Ribosomal RNA processing Brix domain protein (294 aa)
     
        0.521
AT1G02870
Uncharacterized protein (193 aa)
     
        0.518
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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