STRINGSTRING
AT1G14205 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14205" - Ribosomal L.8/L5e family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14205Ribosomal L.8/L5e family protein (165 aa)    
Predicted Functional Partners:
AT3G03770
Leucine-rich repeat protein kinase-like protein (802 aa)
           
  0.984
AT5G66080
Putative protein phosphatase 2C 79 (385 aa)
           
  0.959
AT3G55470
Calcium-dependent lipid-binding domain-containing protein (156 aa)
           
  0.958
FAB1D
Protein FAB1D; The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo- inositol ring, to form phosphatidylinositol 3,5-bisphosphate (By similarity) (1456 aa)
           
  0.801
OPS
OCTOPUS (685 aa)
           
  0.676
AT1G03910
Uncharacterized protein; Required for embryogenesis. May be involved with the spliceosome (716 aa)
           
  0.636
YDA
YODA; Functions in a MAP kinase cascade that acts as a molecular switch to regulate the first cell fate decisions in the zygote and the early embryo. Promotes elongation of the zygote and development of its basal daughter cell into the extra-embryonic suspensor. In stomatal development, acts downstream of the LRR receptor TMM, but upstream of the MKK4/MKK5-MPK3/MPK6 module to regulate stomatal cell fate before the guard mother cell (GMC) is specified. Plays a central role in both guard cell identity and pattern formation. This MAPK cascade also functions downstream of the ER receptor i [...] (883 aa)
           
  0.430
TGA1
Transcription factor TGA1; Transcriptional activator that binds specifically to the DNA sequence 5’-TGACG-3’. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5’-TGACGTGG-3’) another cis-acting element found in plant histone promoters (368 aa)
           
  0.424
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (7%) [HD]