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AT1G14210 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14210" - Ribonuclease T2 family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14210Ribonuclease T2 family protein (247 aa)    
Predicted Functional Partners:
AT1G19550
Glutathione S-transferase-like protein (153 aa)
           
  0.780
AKINBETA1
SNF1-related protein kinase regulatory subunit beta-1 (320 aa)
           
  0.607
LAC7
Laccase 7; Lignin degradation and detoxification of lignin-derived products (567 aa)
           
  0.591
AT2G20420
ATP citrate lyase (ACL) family protein (421 aa)
       
      0.525
AT4G36420
Ribosomal protein L12 family protein (179 aa)
     
      0.523
PK1B
Protein kinase 1B; Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates (By similarity) (423 aa)
           
  0.499
AT4G37660
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein (167 aa)
       
      0.491
RPL12-C
Ribosomal protein L12-C (187 aa)
       
      0.491
RPL12-B
Ribosomal protein L12-B (193 aa)
       
      0.491
RPL12-A
Ribosomal protein L12-A (191 aa)
       
      0.491
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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