STRINGSTRING
AT1G14260 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14260" - RING/FYVE/PHD zinc finger-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14260RING/FYVE/PHD zinc finger-containing protein (265 aa)    
Predicted Functional Partners:
NPL41
NPL4-like protein 1; May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (413 aa)
     
 
  0.776
AT2G47970
NPL4-like protein 2; May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome (413 aa)
     
 
  0.776
AT3G24530
AAA-type ATPase family protein / ankyrin repeat family protein (481 aa)
     
 
  0.674
AT4G23040
UBX domain-containing protein (525 aa)
       
 
  0.670
SAY1
Ara4-interacting protein (564 aa)
       
 
  0.670
AT4G10790
UBX domain-containing protein (480 aa)
       
 
  0.670
AT4G00752
UBX domain-containing protein (469 aa)
       
 
  0.670
AT4G15420
Ubiquitin fusion degradation UFD1 family protein (561 aa)
       
 
  0.574
AT4G38930
Ubiquitin fusion degradation UFD1 family protein (315 aa)
       
 
  0.549
AT2G29070
Ubiquitin fusion degradation UFD1-like protein (312 aa)
       
 
  0.549
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (6%) [HD]