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AT1G14315 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14315" - F-box domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14315F-box domain-containing protein (303 aa)    
Predicted Functional Partners:
AT2G40910
F-box protein (449 aa)
           
  0.775
AT2G18770
P-loop containing nucleoside triphosphate hydrolase-like protein (260 aa)
           
  0.740
EDA32
Embryo sac development arrest 32 (279 aa)
           
  0.637
AT2G16575
Uncharacterized protein (170 aa)
           
  0.599
FAS4
FASCIATED STEM 4 (1237 aa)
           
  0.557
AT3G13670
Protein kinase-like protein (703 aa)
           
  0.554
AT2G28720
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (151 aa)
           
  0.554
AT5G18190
Protein kinase-like protein (691 aa)
           
  0.553
AT3G03940
Protein kinase-like protein (701 aa)
           
  0.553
LAC1
Laccase 1; Lignin degradation and detoxification of lignin-derived products (581 aa)
           
  0.505
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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