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AT1G14460 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14460" - AAA-type ATPase family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14460AAA-type ATPase family protein (1116 aa)    
Predicted Functional Partners:
EMB2775
EMBRYO DEFECTIVE 2775; May be involved in DNA replication and thus regulate cell proliferation (354 aa)
   
  0.988
EMB1968
Embryo defective 1968; May be involved in DNA replication and thus regulate cell proliferation (341 aa)
 
0.985
EMB2810
Replication factor C subunit 3; Functions in cell replication and proliferation. May be involved in chromatin assembly and remodeling. Plays a role in the negative control of pathogenesis-related gene expression and systemic acquired resistance (SAR) (369 aa)
   
0.984
RFC2
Replication factor C 2; May be involved in DNA replication and thus regulate cell proliferation (333 aa)
   
0.984
ATRAD17
RADIATION SENSITIVE 17; Seems to be involved in regulation of DNA repair correlated to non-homologous double strand breaks (DSBs) repair. In vitro, involved in rapid but not in slow DSB repair mechanism (599 aa)
   
  0.974
PCNA2
Proliferating cell nuclear antigen 2; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (By similarity). May be involved in UV resistance (264 aa)
   
  0.968
PCNA1
Proliferating cellular nuclear antigen 1; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
   
  0.968
MTSSB
Single-stranded DNA-binding protein; Binds to ss-DNA (201 aa)
       
 
  0.936
AT3G18580
Single-strand DNA-binding protein (217 aa)
       
 
  0.936
SDN1
Small RNA degrading nuclease 1; 3’-5’ exonuclease degrading single-stranded small RNAs (409 aa)
     
  0.880
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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