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XTH28 protein (Arabidopsis thaliana) - STRING interaction network
"XTH28" - Probable xyloglucan endotransglucosylase/hydrolase protein 28 in Arabidopsis thaliana
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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XTH28Probable xyloglucan endotransglucosylase/hydrolase protein 28; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues (By similarity); Belongs to the glycosyl hydrolase 16 family. XTH group 3 subfamily (332 aa)    
Predicted Functional Partners:
AT1G60000
RNA-binding (RRM/RBD/RNP motifs) family protein; Its function is described as RNA binding, nucleotide binding, nucleic acid binding; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677); BEST Arabidopsis thaliana protein match is- chloroplast RNA-binding protein 31B (TAIR-AT5G50250.1); Has 32490 Blast hits to 20923 proteins in 885 species- Archae - 20; Bacteri [...] (258 aa)
           
  0.739
AT2G02160
CCCH-type zinc finger family protein; Its function is described as zinc ion binding, nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, CCCH-type (InterPro-IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species- Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source- NCBI BLink) (669 aa)
           
  0.587
AT4G03140
NAD(P)-binding Rossmann-fold superfamily protein; Its function is described as oxidoreductase activity, binding, catalytic activity; Involved in oxidation reduction, metabolic process; Located in cellular_component unknown; Expressed in 20 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Short-chain dehydrogenase/reductase, conserved site (InterPro-IPR020904), NAD(P)-binding domain (InterPro-IPR016040), Glucose/ribitol dehydrogenase (InterPro-IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro-IPR002198); BEST Arabidopsis thaliana [...] (343 aa)
           
  0.580
AT5G04460
RING/U-box superfamily protein; Its function is described as zinc ion binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 23 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Zinc finger, RING-type (InterPro-IPR001841); BEST Arabidopsis thaliana protein match is- Ring/U-Box superfamily protein (TAIR-AT2G27950.1) (863 aa)
           
  0.568
AT5G65130
Ethylene-responsive transcription factor ERF057; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (277 aa)
           
  0.560
PME5
Pectin lyase-like superfamily protein; Acts in the modification of cell walls via demethylesterification of cell wall pectin (362 aa)
     
   
  0.558
AT3G18420
Protein prenylyltransferase superfamily protein; Required for the early stage of chloroplast development. May be involved in chloroplast protein biosynthesis and/or degradation (316 aa)
           
  0.557
AT3G48950
Glycoside hydrolase family 28 protein; Pectin lyase-like superfamily protein; Its function is described as polygalacturonase activity; Involved in carbohydrate metabolic process; Located in endomembrane system; Expressed in central cell, flower; Expressed during petal differentiation and expansion stage; Contains the following InterPro domains- Pectin lyase fold/virulence factor (InterPro-IPR011050), Glycoside hydrolase, family 28 (InterPro-IPR000743), Pectin lyase fold (InterPro-IPR012334), Parallel beta-helix repeat (InterPro-IPR006626); BEST Arabidopsis thaliana protein match is- Pe [...] (469 aa)
           
  0.533
AT5G16990
NADP-dependent alkenal double bond reductase P2; Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis (343 aa)
           
  0.529
ACL
Acetone-cyanohydrin lyase; Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES2 appears to be involved in MeSA hydrolysis in planta. This protein does not act on MeGA4, or MEGA9 in vitro (263 aa)
           
  0.499
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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