STRINGSTRING
KNATM protein (Arabidopsis thaliana) - STRING interaction network
"KNATM" - Protein KNATM in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNATMProtein KNATM; Isoform KNATM-B- Transcriptional regulator involved in leaf proximal/distal patterning. May act by sequestering BELL transcription factors (142 aa)    
Predicted Functional Partners:
KNAT5
KNOTTED1-like homeobox gene 5 (383 aa)
           
  0.738
KNAT3
KNOTTED1-like homeobox gene 3 (431 aa)
           
  0.737
KNAT6
KNOTTED1-like homeobox gene 6; Plays a role in meristem function. Contributes to the shoot apical meristem (SAM) maintenance and organ separation by controlling boundary establishment in embryo in a CUC1, CUC2 and STM-dependent manner. Involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5’-TGAC-3’ (329 aa)
           
  0.676
BLH8
BEL1-like homeodomain 8; Required for specifying floral primordia and establishing early internode patterning events during inflorescence development (584 aa)
           
  0.674
KNAT2
Homeobox protein knotted-1-like 2; May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state. Probably binds to the DNA sequence 5’-TGAC-3’ (310 aa)
           
  0.674
KNAT4
KNOTTED1-like homeobox gene 4 (393 aa)
           
  0.670
BLH3
BEL1-like homeodomain 3; Transcription factor that is responsive of the nuclear import of SHOOT MERISTEMLESS (STM) (524 aa)
           
  0.670
BEL1
BELL 1; Plays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed-22786869) (611 aa)
           
  0.637
KNAT1
Homeobox protein knotted-1-like 1; May play a role in meristem function, and may be involved in maintaining cells in an undifferentiated, meristematic state, and its expression disappears at the same time the shoot apex undergoes the transition from vegetative to reproductive development (PubMed-11934861). Positive regulator of LATERAL ORGAN BOUNDARIES (LOB) (PubMed-11934861). Probably binds to the DNA sequence 5’-TGAC-3’ (PubMed-11934861). Able to traffic from the L1 to the L2/L3 layers of the meristem, presumably through plasmodesmata (PubMed-12900451) (398 aa)
           
  0.632
BLH2
BEL1-like homeodomain 2; Transcription factor that establishes leaf shape by repressing growth in specific subdomains of the leaf. Negatively regulates knox homeobox gene KNAT1/BP expression (739 aa)
           
  0.604
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]