STRINGSTRING
AT1G14820 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G14820" - Sec.4-like phosphatidylinositol transfer protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G14820Sec.4-like phosphatidylinositol transfer protein (252 aa)    
Predicted Functional Partners:
UPL4
Ubiquitin-protein ligase 4; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins (1502 aa)
     
   
  0.565
KAK
KAKTUS; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes (1888 aa)
     
   
  0.565
AT1G79990
Structural molecules; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity) (1135 aa)
     
      0.489
AT4G33700
CBS domain-containing protein (424 aa)
     
   
  0.475
AT3G56740
Ubiquitin-associated (UBA) protein; Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis (293 aa)
       
 
  0.414
AT2G41160
Ubiquitin-associated (UBA) protein; Probable rhomboid-type serine protease that catalyzes intramembrane proteolysis (287 aa)
       
 
  0.414
AT5G52790
CBS domain-containing protein with a domain of unknown function (DUF21) (500 aa)
     
   
  0.411
AT4G14240
CBS and DUF21 domain-containing protein (494 aa)
     
   
  0.411
AT4G14230
CBS domain-containing protein with a domain of unknown function (DUF21) (495 aa)
     
   
  0.411
AT3G13070
CBS domain and transporter associated domain-containing protein (661 aa)
     
   
  0.411
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (21%) [HD]