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STRINGSTRING
DL1C protein (Arabidopsis thaliana) - STRING interaction network
"DL1C" - Dynamin-related protein 1C in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DL1CDynamin-related protein 1C; Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (614 aa)    
Predicted Functional Partners:
AT4G17540
Uncharacterized protein At4g17540; Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (294 aa)
           
  0.952
BIGYIN
Tetratricopeptide repeat (TPR)-like superfamily protein; Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division (170 aa)
     
 
  0.949
CLC2
Clathrin light chain protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (258 aa)
       
 
  0.877
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; Its function is described as cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; Involved in protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphoryl [...] (1094 aa)
     
 
  0.863
SNF7.1
Vacuolar protein sorting-associated protein 32 homolog 2; Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity) (219 aa)
     
 
  0.814
SNF7.2
Vacuolar protein sorting-associated protein 32 homolog 1; Component of the ESCRT-III complex, which is required for multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. The ESCRT-III complex is probably involved in the concentration of MVB cargo (By similarity); Belongs to the SNF7 family (213 aa)
     
 
  0.786
FIS1B
Tetratricopeptide repeat (TPR)-like superfamily protein; Component of the peroxisomal and mitochondrial division machineries. Plays a role in promoting the fission of mitochondria and peroxisomes. In association with PEX11C, PEX11D, PEX11E and DRP3A, is involved in cell cycle-associated constitutive self- replication of preexisting peroxisomes (167 aa)
     
 
  0.786
ELM1
Protein of unknown function (DUF1022); Plant-specific factor involved in mitochondria fission. Is required for the correct localization of DRP3A from the cytosol to mitochondrial fission sites. Does not seem to be required for peroxisomal division (427 aa)
           
  0.738
AT1G20760
Calcium-binding EF hand family protein; Its function is described as calcium ion binding; Located in plasma membrane; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- EF-HAND 2 (InterPro-IPR018249), EPS15 homology (EH) (InterPro-IPR000261), EF-hand-like domain (InterPro-IPR011992), Calcium-binding EF-hand (InterPro-IPR002048); BEST Arabidopsis thaliana protein match is- Calcium-binding EF hand family protein (TAIR-AT1G21630.1); Has 12017 Blast hits to 4944 proteins in 443 species- Archae - 20; Bacteria - 3590; Metazoa - 3650; [...] (1019 aa)
     
 
  0.727
AT1G21630
Calcium-binding EF hand family protein; Its function is described as calcium ion binding; Located in cytosol; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- EF-HAND 2 (InterPro-IPR018249), EPS15 homology (EH) (InterPro-IPR000261), Calcium-binding EF-hand (InterPro-IPR002048), EF-hand-like domain (InterPro-IPR011992); BEST Arabidopsis thaliana protein match is- Calcium-binding EF hand family protein (TAIR-AT1G20760.1) (1247 aa)
     
 
  0.720
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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