STRINGSTRING
AT1G15010 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15010" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15010Uncharacterized protein (142 aa)    
Predicted Functional Partners:
AT4G29780
Uncharacterized protein (540 aa)
     
        0.584
AT2G27080
Late embryogenesis abundant hydroxyproline-rich glycoprotein (260 aa)
     
        0.561
BAP1
BON association protein 1; Negative regulator of cell death and defense responses. Exhibits calcium-dependent phospholipid binding properties (192 aa)
     
        0.523
WRKY40
WRKY DNA-binding protein 40; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (302 aa)
     
        0.508
CML38
Calmodulin-like 38; Potential calcium sensor that binds calcium in vitro (177 aa)
     
        0.508
AT2G22880
VQ motif-containing protein (114 aa)
     
        0.494
RRTF1
Redox responsive transcription factor 1; Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity) (268 aa)
     
        0.491
AT3G04640
Glycine-rich protein (159 aa)
     
        0.474
AT5G10695
Uncharacterized protein (67 aa)
     
        0.471
SRC2
Uncharacterized protein; May act as an activator of the calcium-dependent activation of RBOHF that mediates reactive oxygene species (ROS) production and may play a role in cold responses (324 aa)
     
        0.461
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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