• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G15140 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15140" - FAD/NAD(P)-binding oxidoreductase in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15140FAD/NAD(P)-binding oxidoreductase; Its function is described as oxidoreductase activity, copper ion binding; Involved in oxidation reduction; Located in thylakoid, chloroplast, chloroplast stroma, chloroplast envelope; Expressed in 23 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Oxidoreductase FAD/NAD(P)-binding (InterPro-IPR001433), Ferredoxin reductase-type FAD-binding domain (InterPro-IPR017927), Oxidoreductase, FAD-binding domain (InterPro-IPR008333), Riboflavin synthase-like beta-barrel (InterPro-IPR017938), Phenol hydroxylase reduc [...] (295 aa)    
Predicted Functional Partners:
AT4G32360
Pyridine nucleotide-disulphide oxidoreductase family protein; Associates in vitro with the adrenodoxin-like protein MFDX1 to form an efficient low potential electron transfer chain that is able to reduce cytochrome C. Functions as accessory mitochondrial protein involved with BIO2 in the plant biotin synthase reaction (483 aa)
   
 
  0.866
PYRD
Dihydroorotate dehydrogenase (quinone), mitochondrial; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily (460 aa)
     
 
  0.807
PYD1
Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate and the reduction of thymine to 5,6- dihydrothymine (DHT). Involved in the recycling of nitrogen from nucleobases to general nitrogen metabolism; Belongs to the dihydropyrimidine dehydrogenase family (426 aa)
     
 
  0.807
AT4G00040
Chalcone and stilbene synthase family protein; Plant type III polyketide synthases (PKSs) that catalyzes the condensation of malonyl-CoA units with various CoA ester starter molecules to generate a diverse array of natural products including long-chain alkyl alpha-pyrones (385 aa)
           
  0.740
At5g63400
Adenylate kinase 4; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (246 aa)
     
   
  0.691
HCAR
Coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family; Probable iron-sulfur flavoprotein that converts 7- hydroxymethyl chlorophyll a to chlorophyll a using ferredoxin as a reducing equivalent. Catalyzes the reduction of a hydroxymethyl group to a methyl group. Belongs to the chlorophyll catabolic enzymes (CCEs) (462 aa)
   
 
  0.671
AT5G50370
Adenylate kinase family protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family (248 aa)
           
  0.668
CYB-1
Probable transmembrane ascorbate ferrireductase 2; Two-heme-containing cytochrome. Catalyzes ascorbate- dependent trans-membrane ferric-chelate reduction (By similarity) (230 aa)
           
  0.643
NFD1
50S ribosomal protein L21, mitochondrial; Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells) (270 aa)
   
   
  0.626
NTRC
NADPH-dependent thioredoxin reductase 3; Thioredoxin reductase (TR) that exhibits both TR and thioredoxin (Trx) activities. Contains a C-terminal functional Trx domain. Functions as an electron donor for plastidial 2-Cys peroxiredoxins and participates in a NADPH-dependent hydrogen peroxide scavenging system in chloroplasts in the dark. Required for chlorophyll biosynthesis and biogenesis of the photosynthetic apparatus. Activates aerobic cyclase which converts Mg- protoporhyrin monomethyl ester into protochlorophyllide. Involved in a light-dependent regulation of starch biosynthesis b [...] (529 aa)
   
 
  0.621
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (7%) [HD]