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AT1G15270 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15270" - Translation machinery associated TMA7 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G15270Translation machinery associated TMA7; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in plasma membrane; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Translation machinery associated TMA7 (InterPro-IPR015157); BEST Arabidopsis thaliana protein match is- Translation machinery associated TMA7 (TAIR-AT3G16040.1); Has 377 Blast hits to 377 proteins in 132 species- Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 86; Plants - 64; Viruses - 0; Other Eukaryotes - 27 (sou [...] (64 aa)    
Predicted Functional Partners:
SNRNP-G
Probable small nuclear ribonucleoprotein G; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (80 aa)
     
        0.920
NOP10
H/ACA ribonucleoprotein complex subunit 3-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs (By similarity); Belongs to the NOP10 family (64 aa)
     
        0.918
AT3G11500
Small nuclear ribonucleoprotein family protein; Its function is described as molecular_function unknown; Located in nucleolus, nucleus, small nucleolar ribonucleoprotein complex; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Like-Sm ribonucleoprotein (LSM) domain (InterPro-IPR001163), Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type (InterPro-IPR006649), Like-Sm ribonucleoprotein (LSM)-related domain (InterPro-IPR010920); BEST Arabidopsis thaliana protein match is- probable small nuclear ribonucleoprotein G [...] (79 aa)
     
        0.916
AT3G06680
Ribosomal L29e protein family; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L29e (InterPro-IPR002673); BEST Arabidopsis thaliana protein match is- Ribosomal L29e protein family (TAIR-AT3G06700.3); Has 760 Blast hits to 760 proteins in 244 species- Archae - 0; Bacteria - 0; Metazoa - 451; Fungi - 97; Plants - 113; Viruses - 0; Other Eukaryot [...] (83 aa)
     
        0.916
AT3G06700
Ribosomal L29e protein family; Its function is described as structural constituent of ribosome; Involved in translation, ribosome biogenesis; Located in ribosome, cytosolic large ribosomal subunit, nucleolus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L29e (InterPro-IPR002673); BEST Arabidopsis thaliana protein match is- Ribosomal L29e protein family (TAIR-AT3G06680.1); Has 764 Blast hits to 764 proteins in 244 species- Archae - 0; Bacteria - 0; Metazoa - 455; Fungi - 97; Plants - 113; Viruses - 0; Oth [...] (61 aa)
     
        0.915
PFD5
Probable prefoldin subunit 5; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity) (151 aa)
     
        0.912
RUB3
Ubiquitin-related protein 3; May function as a stable post-translational protein modifier (78 aa)
     
        0.905
AT1G11970
Ubiquitin-like superfamily protein; Contains the following InterPro domains- Ubiquitin (InterPro-IPR000626); BEST Arabidopsis thaliana protein match is- ubiquitin-related protein 3 (TAIR-AT1G11980.1); Has 285 Blast hits to 285 proteins in 87 species- Archae - 0; Bacteria - 0; Metazoa - 150; Fungi - 22; Plants - 105; Viruses - 1; Other Eukaryotes - 7 (source- NCBI BLink) (99 aa)
     
        0.905
AT2G22425
Microsomal signal peptidase 12 kDa subunit (SPC12); Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (92 aa)
     
        0.904
AT4G40042
Microsomal signal peptidase 12 kDa subunit (SPC12); Its function is described as peptidase activity; Involved in signal peptide processing; Located in endomembrane system, integral to membrane, signal peptidase complex; Contains the following InterPro domains- Microsomal signal peptidase 12kDa subunit (InterPro-IPR009542); BEST Arabidopsis thaliana protein match is- Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR-AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu [...] (93 aa)
     
        0.902
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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