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ATHSRP54A protein (Arabidopsis thaliana) - STRING interaction network
"ATHSRP54A" - Signal recognition particle 54 kDa protein 1 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ATHSRP54ASignal recognition particle 54 kDa protein 1; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein); Belongs to the GTP-binding SRP family. SRP54 subfamily (479 aa)    
Predicted Functional Partners:
AT1G48160
Signal recognition particle 19 kDa protein, putative / SRP19, putative; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP (145 aa)
     
  0.999
AT3G49100
Signal recognition particle, SRP9/SRP14 subunit; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity) (103 aa)
     
  0.997
AT2G43640
Signal recognition particle, SRP9/SRP14 subunit; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding (By similarity) (121 aa)
     
  0.997
AT5G61970
Signal recognition particle-related / SRP-related; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane (605 aa)
     
  0.992
CAO
Signal recognition particle 43 kDa protein, chloroplastic; Component of the chloroplast signal recognition particle pathway. Required for post-translational targeting of proteins into the thylakoid membrane but seems to be dispensable for co- translational targeting with a translating ribosome present. May be able to function independently of cpFTSY and FFC/cpSRP54 in targeting LHCPs to the thylakoids. Acts as a highly specific chaperone for LHCPs, preventing aggregation and being able to dissolve aggregates (373 aa)
       
  0.991
RPL23AB
60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA (154 aa)
   
  0.988
RPL23AA
Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB (154 aa)
   
  0.988
RPS13A
Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development; Belongs to the universal ribosomal protein uS15 family (151 aa)
 
  0.988
AT3G60770
Ribosomal protein S13/S15; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, cytosolic ribosome, nucleolus, cell wall, chloroplast; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein S13/S15, N-terminal (InterPro-IPR012606), Ribosomal protein S15 (InterPro-IPR000589), S15/NS1, RNA-binding (InterPro-IPR009068); BEST Arabidopsis thaliana protein match is- ribosomal protein S13A (TAIR-AT4G00100.1); Has 1099 Blast hits to 1099 pr [...] (151 aa)
 
  0.988
AT5G67510
Translation protein SH3-like family protein; Its function is described as structural constituent of ribosome, protein binding; Involved in translation; Located in cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Translation protein SH3-like (InterPro-IPR008991), Ribosomal protein L26, eukaryotic/archaeal (InterPro-IPR005756), Ribosomal protein L24, SH3-like (InterPro-IPR014723), Ribosomal protein L24/L26, conserved site (InterPro-IPR005825), KOW ( [...] (146 aa)
 
  0.987
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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