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AT1G15370 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15370" - Uncharacterized protein At1g15370/F9L1_32 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G15370Uncharacterized protein At1g15370/F9L1_32; SNARE-like superfamily protein; Its function is described as molecular_function unknown; Involved in transport; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Longin-like (InterPro-IPR011012); Has 91 Blast hits to 91 proteins in 35 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 67; Viruses - 0; Other Eukaryotes - 12 (source- NCBI BLink) (147 aa)    
Predicted Functional Partners:
AT1G16740
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (126 aa)
     
   
  0.969
RD2
Adenine nucleotide alpha hydrolases-like superfamily protein; Encodes gene that is induced in response to dessication; mRNA expression is seen 10 and 24 hrs after start of dessication treatment (193 aa)
           
  0.838
CYP79F2
Cytochrome P450, family 79, subfamily F, polypeptide 2; Catalyzes the conversion of the long chain elongated methionines penta- and hexahomomethionine to their corresponding aldoximes 8-methylthiooctanaldoxime and 9-methylthiononanaldoxime (537 aa)
           
  0.710
MAML-4
2-isopropylmalate synthase 1, chloroplastic; Encodes an active Arabidopsis isopropylmalate synthase IPMS1. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS1 can be compensated by a second isopropylmalate synthase gene IPMS2 (At1g74040) (631 aa)
           
  0.697
IMS1
2-isopropylmalate synthase 2, chloroplastic; Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily (631 aa)
           
  0.667
CYP79F1
Dihomomethionine N-hydroxylase; Catalyzes the conversion of the short chain elongated methionines di-, tri-, and tetrahomomethionine to their respective aldoximes 5-methylthiopentanaldoxime, 6-methylthiohexanaldoxime, and 7-methylheptanaldoxime (538 aa)
           
  0.645
AT1G12540
Basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Contains the following InterPro domains- Helix-loop-helix DNA-binding domain (InterPro-IPR001092), Helix-loop-helix DNA-binding (InterPro-IPR011598); BEST Arabidopsis thaliana protein match is- basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR-AT1G62975.1); Has 394 Blast hits to 394 proteins in 30 species- Archae - 0; Bacteria - 0; Metazoa - 5; [...] (257 aa)
           
  0.553
KU80
ATP-dependent DNA helicase 2 subunit KU80; Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation (680 aa)
 
            0.551
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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