STRINGSTRING
AT1G15385 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15385" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15385Uncharacterized protein (73 aa)    
Predicted Functional Partners:
AT4G32190
Myosin heavy chain-related protein (783 aa)
       
      0.588
AT4G24840
Uncharacterized protein (756 aa)
       
      0.588
AT3G08530
Clathrin, heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (By similarity). Mediates endocytosis and is required for a correct polar distribution of PIN auxin transporters (1703 aa)
       
      0.588
HUB1
Histone mono-ubiquitination 1; E3 ubiquitin-protein ligase that monoubiquitinates H2B to form H2BK143ub1. H2BK143ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for H3K4me and maybe H3K79me. It thereby plays a central role in histone code and gene regulation. Forms a ubiquitin ligase complex in cooperation with the E2 enzyme UBC2/RAD6. Required for the regulation of flowering time and defense against necrotrophic fungal pathogens (PubMed-12535538, PubMed-17329565, PubMed-17329563, PubMed-19286969). Involved in the control of seed dormancy and [...] (878 aa)
       
      0.588
AT3G14780
Uncharacterized protein (347 aa)
       
      0.476
AT5G54370
Late embryogenesis abundant protein-like protein (337 aa)
     
        0.472
AT4G27400
Late embryogenesis abundant protein-like protein (341 aa)
     
        0.472
GONST2
Encodes a GDP-mannose transporter; GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen (375 aa)
     
        0.471
AT5G24070
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (Probable). The enzyme activity has to be proved (340 aa)
     
        0.468
sks16
SKU5 similar 16 (541 aa)
     
        0.467
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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