STRINGSTRING
AT1G15420 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15420" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15420Uncharacterized protein (278 aa)    
Predicted Functional Partners:
AT1G27470
Transducin family protein / WD-40 repeat family protein (810 aa)
     
  0.999
PCN
POPCORN (815 aa)
     
  0.999
SWA1
SLOW WALKER1; Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed-15634699, PubMed-15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed-15980260) (530 aa)
     
  0.999
AT3G06530
ARM repeat superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (2199 aa)
     
  0.999
AT5G66540
Uncharacterized protein; Involved in nucleolar processing of pre-18S ribosomal RNA (524 aa)
     
  0.999
AT2G18900
transducin/WD-40 repeat-containing protein (804 aa)
     
  0.999
EMB2762
CCAAT-binding factor (577 aa)
     
    0.999
AT3G26480
transducin/WD40 domain-containing protein (764 aa)
     
  0.999
AT3G05060
Putative nucleolar protein 5-2; Required for 60S ribosomal subunit biogenesis (533 aa)
     
  0.999
AT1G27461
Uncharacterized protein (354 aa)
     
 
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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