STRINGSTRING
PWP2 protein (Arabidopsis thaliana) - STRING interaction network
"PWP2" - Periodic tryptophan protein 2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PWP2Periodic tryptophan protein 2 (900 aa)    
Predicted Functional Partners:
AT3G11964
RNA binding protein; Involved in the biogenesis of ribosomal RNA (rRNA). Required for the formation of 5.8S rRNA. Required for normal development of female gametophytes (1896 aa)
     
  0.999
AT4G04940
transducin/WD40 domain-containing protein (910 aa)
     
0.999
YAO
YAOZHE; Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (By similarity). Essential for embryogenesis. Plays a critical role in embryo sac development and gametic cell fate. Required for the correct positioning of the first division plane of zygote. May function during early embryogenesis (PubMed-20699009) (504 aa)
     
0.999
AT3G21540
transducin/WD40 domain-containing protein (955 aa)
     
0.999
AT5G14050
Transducin/WD40 repeat-like superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA (546 aa)
     
  0.999
AT3G06530
ARM repeat superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in ribosome biosynthesis (By similarity) (2199 aa)
     
  0.999
AT2G18900
transducin/WD-40 repeat-containing protein (804 aa)
     
  0.999
AT5G66540
Uncharacterized protein; Involved in nucleolar processing of pre-18S ribosomal RNA (524 aa)
     
  0.999
AT1G27470
Transducin family protein / WD-40 repeat family protein (810 aa)
     
  0.999
FIB2
Fibrillarin 2; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional pre- initiation complex with RNA polymerase II and the general transcription factors (320 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]